Showing 10 results for Arjomand
Volume 3, Issue 4 (12-2017)
Abstract
Background: In recent years, the presence of large amount of research isolating and detecting Arcobacter spp. from animals and humans with diarrhea and from food samples highlights the importance of Arcobacter spp. as emerging food-borne pathogens worldwide. Recently, independent studies have been conducted, making significant progress in the understanding of the classification and pathogenicity of this group of microorganisms. However, the incidence of Arcobacter infection is likely to be underestimated mainly due to the limitations in current detection and identification methods. This study was done to evaluate the effectiveness of staining method (Gram stain using 1% fuchsinein direct smear) versus PCR as the gold standard.
Materials and Methods: A total of 150 stool samples were collected from under 6 years of age children with diarrhea from clinical centers of Arak. Direct smears of samples were stained with a modified gram staining method (1% fuchsin for 5 minutes with heat). Concurrently, PCR amplification method was performed for all DNA samples.
Results: Arcobacter spp. was isolated by PCR from 28 out of 150 stool samples. Direct staining method identified 79 samples as Campylobacter-like organisms with a sensitivity and specificity values of 100 and 65.50%, respectively.
Conclusion: Detection of Campylobacter-like organisms by 1% fuchsin is simple, inexpensive, and fast with high sensitivity and specificity. Laboratories with limited resources can employ modified gram staining method to detect Campylobacteriaceae infection in early stages.
Volume 5, Issue 1 (Winter 2019)
Abstract
Aims: In recent years, Arcobacter has been isolated from various samples. It can cause diseases both in human and animal and be transmitted to human through water, food, and continuous contact with poultry meat. Therefore, people exposed to the contaminated meat such as chicken meat can be exposed to Arcobacter too and as a part of its transmission route. Thus, in this study, the frequency of Arcobacter species was evaluated in slaughterhouse workers and poultry meat sellers and healthy people not exposed to the poultry meat.
Materials & Methods: In the present study, 85 slaughterhouse workers and poultry meat sellers (exposed group) and 85 healthy people with other jobs (non-exposed group) were studied. By simple method, fecal samples were collected from Health Center of Arak city and tested by 4 methods including direct observation, culture, PCR, and m-PCR.
Findings: Campylobacter-like organisms were observed in 32 out of 85 samples from the exposed group and in 11 out of 85 samples from the non-exposed group by microscopic observation method. No sample was positive by culture method. However, by PCR method, the frequency of Arcobacter strains was 20 in the exposed group and 6 in the non-exposed group. According to the m-PCR results, among the 170 samples, 21 A. cryaerophilus and 14 A. butzleri strains were identified.
Conclusion: Chicken carcass are introduced as a main reservoir for Arcobacter; therefore, continuous contact with poultry meat can have a significant effect on the transmission of Arcobacter strains to individuals. Therefore, this study showed that the frequency of Arcobacter strains is more in exposed group than in non-exposed group.
Volume 5, Issue 1 (Winter 2019)
Abstract
Aim: Thermophilic Campylobacter is the first cause of gastroenteritis infection in human. Nowadays, the prevalence of Campylobacter spp. is higher than other bacteria causing intestinal infection such as Salmonella and Shigella. This study was designed to compare the frequency of Campylobacter species in poultry slaughterhouse workers and poultry meat sellers (exposed group) and in healthy people (non-exposed group) in Arak city.
Materials & Methods: Among the 104 samples, 52 samples were collected from the slaughterhouse workers and poultry meat sellers, and 52 samples were collected from the control group. The stool samples were taken from the slaughterhouse workers, poultry meat seller, and healthy people who had not received antibiotics for the last two weeks. For enrichment, the samples were enriched in Preston broth medium at 37℃ for 48 hrs under the microaerophilic conditions. Then they were sub cultured using a passive filtration method on Brucella agar at 37℃ for 72 hrs under the microaerophilic conditions. Finally, the samples were directly tested using genus- and species specific PCR primers.
Findings: Of 52 samples collected from the slaughterhouse workers and poultry meat sellers, 11 (21.1%) samples were positive for the presence of Campylobacter spp. by PCR, and of 52 samples collected from the healthy people, 2 (3.8%) samples were reported as positive. The most frequent species isolated from the 2 groups were C.jejuni (53.84%) and C.coli (23.07%), respectively.
Conclusion: Chicken is identified as one of the important sources of Campylobacter infections in humans, which may contaminate poultry Slaughterhouse workers and chicken meat sellers, which in turn, they could potentially transmit Campylobacter strains to healthy people and chicken meat.
Volume 7, Issue 4 (Winter 2023)
Abstract
Research subject: Millions of dollars of non-renewable capital are burned in flares every year, in the oil and gas industries, which in addition to polluting the air has no income for the industry. In Iran and South Pars region, due to the presence of gas refineries, a considerable amount of gas is burned in the flares. In this research, as a comprehensive study, the technical and economic investigation of the recovery of flare gases has been discussed.
Research approach: For this purpose, Aspen Plus software was used to simulate the desired unit in the set of flares of South Pars refinery phases 22-24. The simulation consists of two recovery parts: the flare gases recovery by use of a liquid ring compressor and power generation by the heat from the combustion of the flare gases through the application of the reheat steam Rankine cycle. The profitability of the project includes naphtha cuts and liquefied gas recovered from gases sent to the flare on one hand and power generation in turbines on the other hand.
Main results: The effect of the amount of air entering the combustion chamber on the temperature of the exhaust gas was investigated. The amount of air entering the combustion chamber was determined to be 2685 tons per hour in order to obtain supercritical water vapor with a temperature of about 650 ºC and a pressure of 26 kPa in the Rankine cycle. Using the simulation results, the temperature diagram was drawn in terms of entropy, and in addition to the steam phase diagram during the cycle, the steam Rankine cycle diagram was also drawn. The results of this research showed that the designed process will produce 5365 kg/h of naphtha, 179.45 kg/h of LPG, 25903 kW, and 101124 kW power in two separate turbines, and an annual sales income of 24,782,194 $. In addition, it was shown that the investment return period of this process is equal to 2.5 months.
Volume 8, Issue 2 (Spring 2022)
Abstract
Backgrounds: Arcobacter is an emerging bacterium that may cause watery diarrhea and septicemia in humans. This study aimed to investigate the prevalence of Arcobacter spp. in diarrheal stool specimens using culture and molecular methods, their genetic diversity, and their resistance to different antibiotics in patients referring to clinical centers in Arak, Iran.
Materials & Methods: In this descriptive cross-sectional study, diarrheal stool specimens were collected from 230 patients over a two-month period from July to September 2016. The samples were tested for the presence of Arcobacter species. Suspected colonies were subjected to biochemical tests and identified by phenotypic methods. In addition, antimicrobial susceptibility testing was performed using the disk diffusion method. Arcobacter spp. were also directly detected by multiplex-PCR.
Findings: Out of 230 samples, 20 samples (8.69%) were positive in culture method, and 44 samples (19.13%) were positive in PCR method, all culture-positive samples were also positive in PCR method. Rep-PCR indicated 14 different rep types among Arcobacter spp. isolated from patients with gastroenteritis. All Arcobacter isolates were resistant to cefazolin, ceftazidime, and nalidixic acid. The isolates showed high susceptibility to tetracycline, gentamicin, ampicillin, amikacin, meropenem, erythromycin, and ciprofloxacin.
Conclusions: To the best of our knowledge, this is the first study conducted in Iran to isolate Arcobacter spp. from patients with gastroenteritis. The results indicate that Arcobacter spp. are one of the main causes of acute diarrhea in humans. The research outcomes show that Arcobacter spp. could be considered as the etiology of gastrointestinal infections in humans.
Volume 8, Issue 3 (Summer 2022)
Abstract
Backgrounds: Abnormal vaginal discharge is a common problem among pregnant women. The most common cause of these discharges is bacterial vaginosis (BV), which has numerous complications and causes problems for pregnant mothers and their fetuses. The purpose of this study was to determine the BV frequency among pregnant women referring to a gynecology clinic in Arak city using Amsel and Nugent criteria, Alberta guideline, and PCR.
Materials & Methods: This descriptive study was performed on 70 vaginal samples of pregnant women in Arak to investigate the most common causes of vaginal discharge according to Amsel and Nugent criteria and polymerase chain reaction (PCR) method using specific primers targeted towards three bacteria: Gardnerella vaginalis, Atopobium vaginae, Mobiluncus curtisii. Data were analyzed using SPSS software and Chi-square test.
Findings: In this study, ten (14.28%) out of 70 pregnant women had positive bacterial vaginosis according to Amsel criteria. According to Nugent criteria and Alberta guideline, three (4.29%) cases were diagnosed with definite BV, 20 (32.26%) cases with intermediate BV with clue cells, 42 (67.74%) cases with intermediate BV without clue cells, and finally five (4.29%) cases with negative BV. Also, according to PCR, the frequency of G. vaginalis, M. curtisii, and A. vaginae in vaginal samples was 71.42% (50 cases), 64.28% (45 cases), and 30% (21 cases), respectively.
Conclusion: According to the obtained results, the prevalence of definite bacterial vaginosis was lower than that of vaginitis, and most patients suffered from nonspecific vaginitis.
Volume 9, Issue 1 (Winter 2023)
Abstract
Backgrounds: Bacterial infections are the most common complication in cancer patients. Infection with multi-drug resistant bacteria has recently become a worrying phenomenon in cancer patients.
This study focused on Gram-negative bacteria isolated from clinical samples of cancer patients. The purpose of this study was to evaluate the presence and prevalence of drug resistance genes, including metallobetalactamase (blaIMP and blaVIM) and carbapenemase (blaKPC and blaGES) genes, in the main bacteria agents of nosocomial infections in cancer patients, such as Acinetobacter baumannii, Pseudomonas aeruginosa, Klebsiella pneumoniae, and Escherichia coli.
Materials & Methods: Common biochemical methods were used to identify bacterial isolates. Antimicrobial susceptibility testing was performed according to the standard method recommended by the Clinical and Laboratory Standards Institute (2019).
Polymerase chain reaction (PCR) method was also used to check the presence and prevalence of resistance genes.
Findings: During six months, from May to November 2020, 250 clinical samples were collected from cancer patients in Ayatollah Khansari hospital in Arak city, Iran. From which 80 Gram-negative bacilli were isolated, including 33 (41.2%) E. coli, 15 (18.7%) A. baumannii complex, 12 (15%) P. aeruginosa, eight (10%) K. pneumoniae, seven (8.7%) Citrobacter freundii, and five (6.2%) Enterobacter aerogenes isolates. The frequency of blaKPC, blaGES, blaIMP, and blaVIM genes was 39.95, 21.25, 16.25, and 17.45%, respectively.
Conclusion: The present study emphasizes the importance of identifying Gram negative rods and their resistance genes (metallobetalactamase and carbapenemase genes) in cancer patients, carrying out preventive instructions to prevent the transmission of resistance genes, and reducing mortality in these patients.
R. Darvishzadeh , N. Arjomand , R. Najafzadeh , R. Heydari,
Volume 9, Issue 2 (Spring 2018)
Abstract
Aims: Sclerotinia is an important fungal disease of sunflower in Iran that affects its yield. The present study was conducted with the aim of evaluating proline content, total protein, and protein electrophoresis pattern in sunflower (Helianthus annuus L.) in response to sclerotinia (Sclerotinia sclerotiorum) disease.
Materials and Methods: In this experimental study, proline content, total protein, and protein electrophoresis pattern in sunflower lines (C39 and C100) were compared with control group during different times after inoculation of the lines with the Sclerotinia fungal isolates (SSU107 and SSKH41) under controlled conditions and as a factorial based on completely randomized design (CRD). Separation and isolation of total proteins extracted by sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS-PAGE). The date were analyzed by SPSS 22 software, using multivariate analysis of variance and Tukey test.
Findings: Resistant line C39 in all of the time periods after being infected had higher proline compared with control and other groups. The total protein of all control plants was higher than that of infected plants with both fungal isolates. Fungal infection accumulated low molecular weight proteins in both lines, so that some proteins in the resistant and some proteins in susceptible lines were produced and removed, respectively.
Conclusion: Resistant line C39 in sunflower infected with fungal isolate SSU107 Sclerotinia sclerotiorum has the highest proline content. Fungal infection, especially in resistant lines, leads to a reduction in total protein levels and the accumulation of low molecular weight proteins in resistant and susceptible lines.
Volume 15, Issue 4 (7-2013)
Abstract
In production of tissue paper, the adhesion of a liquid adhesive creping aid, compound polymer, as creping aids on the Yankee dryer surface was investigated. A compound polymer was prepared based on mixing ratio of poly (amideamine)-epichlorohydrin resin (PAE) as an adhesive agent, polyvinyl alcohol (PVA) as a modifier agent, and cationic fatty acid (CFA) and ethylene glycol (EG) as release agents. In order to simulate the Yankee dryer cylinder, the adherence of paper to the substrate that was coated by the compound polymer solution was measured using a peel strength test. Results indicated that increasing the percent of total solid content of compound polymer would increase peel strength of paper. Peel strength of paper increases if EG as a release agent is used. The amount of PVA/PAE resin in the formulation of creping aid was critical for building a flexible and tough coating layer on to the substrate and to provide adequate adhesion of paper in peel strength test.
Volume 16, Issue 4 (1-2016)
Abstract
Theoretical and empirical equations developed for calculating the magnitude of earthquakes are affected by a lot of parameters. Most of these parameters need to be measured and entered in the equations accurately, while, in many areas, due to the lack of required equipment, these parameters mostly are measured approximately and with low precision or even sometimes assumed. Moreover, these equations usually are exclusive of a specific region or state, so they are not reliable enough for other new regions.
On the other hand, neural networks have been proven to be one of the most practical effects in modelling and forecasting. There are three major advantages of neural networks. First, neural networks are able to learn any complex non-linear mapping. Second, they do not make a priori assumption about the distribution of data. Third, they are very flexible with respect to incomplete, missing and noise data (Vellido et al, 1999). Moreover, neural networks, regardless of the region and country, are a general solution in all areas.
The aim of this paper is to use a kind of neural network system named Multilayer Perceptron (MLP), which is one of the most influential neural network models, to predict the magnitude of the earthquakes.
This method consists of several layers of nodes. It includes an input layer, an output layer, and a hidden layer, each of which contain input node(s), output node(s), and hidden node(s), respectively.
The input nodes are based on some variables. In the current research, six independent variables including three spatial variables, one time variable and two variable related to physical characteristics are defined. The output nodes of neural networks are the prediction outputs or labels.
The seismic data that have been used in the research are got from the whole instrumentally recorded earthquakes occurred in Iran.
From whole data, 85% are used for network training and 10% for network testing and revising. The remained 5% is dedicated to derive the final prediction of the magnitudes of earthquakes. Then, these predictions have been compared with exact values to assess the network prediction ability.
In the hidden layer, as there is no method to decide the optimal number of hidden nodes directly, four different numbers of hidden nodes are chosen, including 8, 12, 16 and 20. Moreover, a well-known concern with neural networks is ‘‘overtraining”. To ease this problem, a set of four different learning epochs are used, including 1, 2, 4 and 8. Moreover, in training part, two different training methods, named Batch and Online, were applicable. In order to reach to more comprehensive results, both of these methods are applied. As a result, we setup 32 different groups of parameters and models.
After all, the results of the study indicate that MLP network has a good capability for predicting the magnitude of earthquakes. The average correct prediction of the models is about 70%.
To conclude, according to the results, the network is a functional device in predicting the magnitude of the earthquake of a region in an arbitrarily considered time.