Search published articles


Showing 18 results for Darvishzadeh


Volume 3, Issue 1 (3-2014)
Abstract

Black stem is one of the most important fungal diseases of sunflower which is caused by Phoma macdonaldii. This research was conducted to clarify the interactions between a few breeder lines and wild-type accessions of sunflower with seven isolates of Phoma macdonaldii, the causal agent, under controlled conditions. The experiment was carried out in randomized complete block design with three replications. Each replication consisted of 30 seedlings. Twenty micro liters of spore suspension was deposited at the intersection of the cotyledon petiole and hypocotyl of four-leaf-stage sunflower seedlings as well. Three, five and seven days after inoculation, seedlings were scored on a 1-9 scale for percentage of necrotic area. Highly significant differences were observed among genotypes, isolates and their interactions for disease severity 7 days after inoculation based on AUDPC (Area Under Disease Progress Curve) values. Two models of GGE biplot including Isolate-based and genotype-based models were used to study the pathogenicity of the isolates and susceptibility of sunflower, respectively. Isolate-focused biplot revealed that there was a considerable difference between virulence of isolates. Based on genotype-focused biplot model, accessions including 665 Iowa, 1012 Nebraska, 211 Illinois and 1016 Nebraska were more resistant to studied isolates of P. macdnaldii. Results revealed that GGE biplot approach could lead to good understanding about interactions between sunflower genotypes and Phoma macdonaldii isolates.  

Volume 4, Issue 3 (fall 2023)
Abstract

Aims: Home businesses have a historical background. With the advent of the virtual space, many people have started to create a business in their home environment for various reasons. This change has had many visible and invisible effects not only in the home and family, but also in the city. The upcoming research is focused on determining the ranking of the components and social dimensions of sustainable development under the influence of home businesses in order to determine their priority.
Methods: Descriptive-analytical research method with quantitative method and qualitative results and the results are based on the opinions of 35 experts based on the results of a specialized questionnaire. In conclusion, the 25 components and 9 indicators of the social subcategory of sustainable urban development based on the 2030 sustainable development document, using a structured questionnaire and its analysis with EXCEL and SPSS software, tries to make changes related to division and prioritization.
findings: The components “Social Empowerment, literacy  , Quality Education , Social Responsibilities , Manpower Development, Social Confidence, Amount of Crimes, Neighborhood Development, Social Streaming” and the indicators “Education, Sustainable Cities and Communities, Social Security , Social Capital” are heavily influenced by home businesses .
Conclusion: The main results showed that home businesses, both online and offline, directly and indirectly have a significant impact on the social dimension of sustainable urban social development, And it is suggested to planning for sustainability goals of countries.

, Reza Darvishzadeh, , ,
Volume 5, Issue 2 (8-2014)
Abstract

This study was conducted to evaluate genetic variation among 70 sunflower recombinant inbred lines (RIL) derived from the crosses PAC2 × RHA266 together with parents based on seed morphological traits by using a rectangular lattice design with two replications. Seed morphological such as kernel length, kernel width, kernel diameter, 100-kernel weight, percentage of hull, percentage of dehulled kernel and seed yield per plant was measured. Analysis of variance revealed significant differences among lines for the studied traits. The highest coefficient of phenotypic variation was observed for seed yield per plant (23.42) and the lowest one was observed for percentage of dehulled kernel (1.37). The highest heritability was observed for 100-kernel weight (0.995) and kernel width (0.990) and the lowest one was observed for the yield per plant (0.521). The highest correlation coefficients were observed between kernel diameter and kernel width (0.908). Principal component analysis reduced the seed characteristics traits to 2 components explaining 81% accumulative variance. By using Ward clustering method based on seed morphological traits the 72 studied sunflower lines were classified into six groups.
, Reza Darvishzadeh, , , ,
Volume 6, Issue 2 (11-2015)
Abstract

This study was designed to investigate the genetic diversity and relationships between yield and related traits in oily sunflower lines. 152 sunflower lines collected from different parts of the world were investigated at completely randomized design with nine replications on Urmia University in 1391 under pot conditions. 14 agro-morphological traits including plant height, stem diameter, number of leaves, leaf length, leaf width, petiole length, head diameter, 100 seed weight, head dry weight, , seed yield per plant, number of days from planting to flowering, and number of days from planting to maturity, dehulled kernel to whole kernel and harvest index were measured. Analysis of variance revealed significant differences among genotypes for all studied traits. Among the traits, the highest coefficient of phenotypic variation was observed for seed yield per plant (56.30), harvest index (44.4) and head dry weight (35.44). The results of correlation analysis showed that there is significant and positive correlation between seed yield per plant with most of the studied traits. Results of sequential path analysis revealed that the variables such as number of leaves, dehulled kernel to whole kernel, head diameter, and plant height were arranged as the first-order variables. Cluster analysis subdivided the genotypes into 4 groups. The maximum distance were observed between the genotype from groups 3 and 4 (28.30).
, Reza Darvishzadeh, , ,
Volume 7, Issue 1 (6-2016)
Abstract

Drought is known as an important factor limiting growth and product of field crops in most parts of the world and Iran. In the present work, the genetic diversity of 100 inbred lines of sunflower was investigated based on agro-morphogical characters with simple lattic design with two replications under normal and drought stress conditions. Combined analysis of variance revealed significant differences among lines for most of studied traits. Uneder normal condition, the highest coefficient of genetic variation was observed for stem diameter and the lowest one observed for relative water content. In drought stress condition, the highest coefficient of genetic variation was observed for seed yield per plant and the lowest one observed for days to flowering. The results of correlation analysis showed that there is significant and positive correlation between seed yield per plant with most of the studied traits in both stress conditions. Stepwise regression analysis revealed that under drought stress condition 73.9 percent of seed yield per plant variation was expailed by heed diameter, leaf width and petiol length and in normal condition 73.6 yield grain per plant variation explained by head diameter and plant height. Cluster analysis grouped lines into 4 clusters in each one of normal and drought conditions but the distruption of lines within groups were differents depending to stress environment that present the genetic variability for drought tolerance in sunflower lines.
, Reza Darvishzadeh, , , ,
Volume 7, Issue 3 (Special Issue 2016)
Abstract

One of the newest methods in plant breeding programs is mapping quantitative trait loci (QTL) with molecular markers. In order to identify QTL associated with some chemical traits such as chlorine, nicotine, sugar concentrations and ash in oriental tobacco, a population of 55 recombinant inbred lines coming from the cross Basma seres 31 × SPT406 were evaluated for above mentioned traits. QTL mapping was performed using linkage map developed on 103 recombinant inbred lines by 64 molecular markers including 14 SSR, 24 ISSR and 26 retrotransposone. The linkage map is composed of 7 linkage groups (LGs). Composite interval mapping revealed 5 QTLs associated with studied traits. Phenotypic variation explained by identified QTLs varied between 0.34 and 0.70. Any QTL was not detected for sugar concentration in tobacco leaves. Common markers between some of studied traits can be due to linkage or pleiotropic effects. The common markers lead to increase the efficiency of marker-assisted selection in plant breeding programs via simultaneously selection for several traits.
Z. Aghaali, R. Darvishzadeh, M. Aghaei,
Volume 9, Issue 1 (Winter 2018)
Abstract

Aims: The aim of the present study was to map the morphological traits in Iranian Basil accessions (Oscillum Oscillos) by Inter Simple Sequence Repeats (ISSRs) markers. 
Materials & Methods: In this experimental study, 50 Iranian basil accessions from different geographical regions were used and the experiment was based on a completely randomized design. Extracting DNA and PCR was performed with 12 ISSR primers for Basil accessions. Components of variance, general heritability, and genetic and phenotypic variation coefficients were calculated by formula. Bayesian method, linear mixed model as well as Minitab 17, DARwin 5, Structure 2.3.3, Tassel 3, and SPSS 20 software were used.  Findings: There was a positive correlation between the majority of traits for basil accessions. The highest coefficient of genetic variation was observed in stem diameter and internode length and the lowest was observed in flower number. Heritability varied between 3.63% and 94.24%. Foutrteen loci with 7 traits were recognized. The range of phenotypic changes varied from 3% to 29%. The highest number of locus was obtained for stem diameter traits and the lowest was obtained for lateral branch number. Six loci were specifically associated with only one trait and other loci were common in traits. The phenotypic variation varied between 17% and 29%. 
Conclusion: Traits have a wide variety in Basil accessions and there is a positive correlation between the majority of them. The heritability of the traits varies from 3.63% to 94.24% and the range of the phenotypic changes varies from 3% to 29%. The highest number is for stem diameter traits and lowest is for lateral branch number. Six loci are specifically associated with only one trait and other loci are common in traits. The phenotypic variation varies between 29% ‐17%. 

R. Darvishzadeh , N. Arjomand , R. Najafzadeh , R. Heydari,
Volume 9, Issue 2 (Spring 2018)
Abstract

Aims: Sclerotinia is an important fungal disease of sunflower in Iran that affects its yield. The present study was conducted with the aim of evaluating proline content, total protein, and protein electrophoresis pattern in sunflower (Helianthus annuus L.) in response to sclerotinia (Sclerotinia sclerotiorum) disease.
Materials and Methods: In this experimental study, proline content, total protein, and protein electrophoresis pattern in sunflower lines (C39 and C100) were compared with control group during different times after inoculation of the lines with the Sclerotinia fungal isolates (SSU107 and SSKH41) under controlled conditions and as a factorial based on completely randomized design (CRD). Separation and isolation of total proteins extracted by sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS-PAGE). The date were analyzed by SPSS 22 software, using multivariate analysis of variance and Tukey test.
Findings: Resistant line C39 in all of the time periods after being infected had higher proline compared with control and other groups. The total protein of all control plants was higher than that of infected plants with both fungal isolates. Fungal infection accumulated low molecular weight proteins in both lines, so that some proteins in the resistant and some proteins in susceptible lines were produced and removed, respectively.
Conclusion: Resistant line C39 in sunflower infected with fungal isolate SSU107 Sclerotinia sclerotiorum has the highest proline content. Fungal infection, especially in resistant lines, leads to a reduction in total protein levels and the accumulation of low molecular weight proteins in resistant and susceptible lines.

R. Paknia, R. Darvishzadeh , F. Shahriari , S. Malekzadeh,
Volume 9, Issue 3 (Summer 2018)
Abstract

Aims: Sunflower (Helianthus annuus L.) is mainly cultivated for the extraction of edible oil, and Sclerotinia sclerotiorum is a pathogen in sunflower fields. The aim of this study was to indetify markers associated with resistance to Sclerotnia Scleritiorum diseases in sunflower, using association analysis.
Materials and Methods: In the present experimental research, a population including 100 lines of oily sunflower was cultivated. Traits such as contamination progress after 4, 8, and 12 days, 100 seeds weight of contaminated and non-contaminated plants, contaminated and non-contaminated plant yield, 100 seeds weight loss, and yield loss were studied. The molecular profiles of germplasm were prepred with 30 microsatellite primer pairs. Genetic structure analysis of population was performed based on Bayesian model.
Findings: The highest coefficient of variation was related to the yield loss (86.41%) and weight loss (78.48%), and the lowest was contamination progression after 8 and 12 days (26.47% and 20.44%), respectively. Based on the mixed linear model (MLM), 6 microsatellite markers related to traits were identified at the level of p≤0.01. The highest number of markers was associated with contamination progression after 8 days. The P733, P807, and P1256 markers were simultaneously associated with 3 traits.
Conclusion: Four lines including RHA274, H100A-83HR4, B45-03, and Iranian line with code 28 were identified with different genetic origins and high resistance levels. According to the general linear model (GLM) and MLM, 24 and 15 SSR markers are related to the traits, respectively. The P733, P807, and P1256 markers are simultaneously associated with 3 traits.

A. Ghaffari Azar , R. Darvishzadeh , B. Molaei, D. Kahrizi, B. Darvishi,
Volume 10, Issue 2 (Spring 2019)
Abstract

Maize (Zea mays L.) is one of the most cultivated crops worldwide, owing to its versatility and wide adaptability, and serves as food, animal feed, and raw material for various industrial products. The purpose of the current research was the classification of maize inbred lines in order to produce hybrid seeds based on agro-morphological traits. Each of 100 maize inbred lines was planted in 6 pots as 6 replications and arranged in completely randomized design in an open area near to greenhouse in 2015. The result of the analysis of variance revealed significant differences among lines for all studied traits. The highest correlation was seen between cob’s length and cob’s weight. Stepwise regression analysis revealed that 66.4% of seed yield per plant variation was determined by cob’s length and cob’s weight. Cluster analysis divided inbred lines into 4 groups. The highest Mahalanobis distance (28.07) was observed between cluster 2 and 4. The result of principal component analysis confirmed the calcification by cluster analysis. The genotypes from groups 2 and 4 can be potentially used as parental lines in hybrid varieties production and development of segregating populations.

M. Sharifi Alishah, R. Darvishzadeh, M. Ahmadabadi, Y. Piri Kashtiban, K. Hasanpur,
Volume 10, Issue 4 (Fall 2019)
Abstract

Revealing DNA sequences is vital for all branches of biological sciences. Next-Generation Sequencing (NGS) is a different approach in this area so that it has created a great evolution in biology science and covers various aspects of genome, transcriptome, epigenome and metagenome-level studies. NGS is considered as a high-performance method for genomic and transcriptomic information analysis in comparison with traditional methods due to providing good genomic coverage, determining each single pairs of bases and eliminating the first generation sequencing disadvantages (Sanger sequencing). Use of NGS has begun since 2005 and 2006, after the commercialization of various apparatus companies such as ABI/SOLiD Illumina, Science Roch/454Life, and Solexa to study the transcriptome of the model and non-model organisms. Recently, RNA sequencing is used widely to identify genes associated with growth and development processes and their expression patterns in response to a variety of biological and non-biological stresses, in various organs and growth stages in different organisms. It helps scientists to determine the amounts of gene expression, differentiation of different isoforms of genes, detection of gene fusions and characterization of small RNA as well as alternative splicing events, duplicate elements, exon of genes, new transcripts, UTRs, SNPs, and somatic mutations. The RNA-seq method typically consists of providing suitable biological samples, isolation of total RNA, enrichment of non-ribosomal RNAs, conversion of RNA to cDNA, construction of a fragment library, selecting size and adding linkers and sequencing on high-throughput sequencing platform, alignment, and assembly of the reads and downstream analysis.


Volume 14, Issue 3 (5-2012)
Abstract

Calpastatin (CAST) is a specific inhibiter of calpains, playing a role in meat tenderization and myogenesis. In the present study, the polymorphism of the CAST gene of Makoei sheep was investigated by polymerase chain reaction and single strand conformation polymorphism technique (PCR–SSCP). Genomic DNA was extracted from whole blood samples collected from 100 sheep. A 622 bp CAST exon 1 segment was amplified by standard PCR, using the locus specific primers. PCR products were subjected to a non-denaturing gel electrophoresis. Four SSCP patterns, representing four different genotypes, were identified. The frequencies of the observed genotypes were 0.31, 0.04, 0.63 and 0.02 for AA, BB AB and AC, respectively. Allele frequencies were 0.6313, 0.3586 and 0.01 for A, B and C, respectively. The Observed heterozygosity (Hobs) value for CAST gene was 0.4728. The chi-square test showed significant (P< 0.01) deviation from Hardy-Weinberg equilibrium for this locus in Makoei sheep population.

Volume 14, Issue 6 (11-2012)
Abstract

The Sunn pest is a serious pest of cereals causing severe damage to cereals especially of wheat. Its life cycle has two different phases, one is growth and development phase and the other is diapause phase which takes place in adult stage. In this study the effects of juvenile hormone analogue pyriproxyfen, ecdysone analogue methoxyfenozide and mixture of pyriproxyfen and methoxyfenozide on diapause termination of

Volume 15, Issue 5 (9-2013)
Abstract

The major objective of seedless grape breeding program is production of grapes with high quality. Breeding of seedless grapes is difficult because the embryos are aborted after fertilization. Embryo rescue technique is utilized to obtain plants from crosses between seedless cultivars. In the present study, the effect of paternal genotypes and different IAA concentrations in presence of BA applications were investigated on embryo rescue in Askari cultivar in randomized complete block design with three replications. Sprays with BA were performed two times at 18 E-L and 27 E-L stages. Hybrid embryos were produced from the cross between Askari cultivar as a female parent and Ruby Seedless, Bidane Sefid, and Bidane Ghermez as male parents. Forty days after pollination (at 29 E-L stage), ovules were cultured on NN medium with three different concentrations of IAA (1, 1.75, 3 mg L-1). The results showed that male genotypes and different concentrations of IAA on the media had a significant effect on embryo germination. BA treatment did not affect the embryo germination solely. But, the effect of BA and different concentrations of IAA was significant on embryo germination. The best concentration of IAA with BA treatment was 1 mg L-1 and without BA was 3 mg L-1. The highest embryo germination rate was observed in 'Askari×Ruby Seedless' cross that was pretreated with BA and cultured on medium with 1 mg L-1 IAA concentration.

Volume 17, Issue 1 (1-2015)
Abstract

Basal stem rot caused by Sclerotinia sclerotiorum (Lib.) de Bary is one of the most important diseases of sunflower. Quantitative trait loci (QTL) implicated in partial resistance to two isolates of S. sclerotiorum (SSU107 and SSKH41) were investigated using F9 recombinant inbred lines (RILs) from the cross between sunflower parental lines PAC2 and RHA266. Experiments were conducted in completely randomized design with 3-6 replications under controlled conditions. The reaction of genotypes to basal stem rot disease was evaluated by measuring the percentage of necrosis area three days after inoculation. Combined analysis of experiments showed significant interactions between sunflower genotypes and S. sclerotiorum isolates suggesting that partial resistance to S. sclerotiorum should be isolate-specific in sunflower. QTLs were mapped using an updated high-density SSR and SNP linkage map. The map consisted of 210 SSRs and 11 gene-derived markers placed in 17 linkage groups (LGs). The total map length was 1,653.1 cM with a mean density of 1 marker per 7.44 cM. A total of 14 QTLs were detected for partial resistance to two isolates. The phenotypic variance explained by QTLs (R2) ranged from 0.10 to 9.85. The sign of additive gene effects showed that favorable alleles for partial resistance to isolates came from both parents. Six QTLs were common between two isolates on LGs 1, 8 and 17, whereas the others were specific for each isolate. Co-localized QTLs on LG 1 were linked to the glutathione S-transferase gene (GST). The co-localized QTLs for partial resistance to basal stem rot isolates could be good candidates for marker assisted selection (MAS).

Volume 18, Issue 5 (9-2016)
Abstract

Broomrape is a debilitating holoparasiting weed in tobacco (Nicotiana tabacum L.) fields with devastating effects on its production. In this study, the reaction of 89 tobacco genotypes was evaluated against broomrape (Orobanche aegyptiaca) in randomized complete block design with three replications during two years. In each year, genotypes were planted in both non-inoculated and inoculated conditions where the soil of pots was mixed with 0.06 g of broomrape seed. Considering the average data of two years, studied genotypes did not show infection to broomrape at non-inoculated condition, whereas in inoculated condition, the majority of genotypes showed infection to broomrape. Two genotypes including ‘TB 22’ and ‘Kramograd NHH 659’ did not show any infection to broomrape in inoculated condition. In a molecular experiment, the fingerprint of tobacco genotypes was prepared with 26 SSR loci. Using model-based Bayesian approach, the studied association panel was divided into three subgroups. The D¢ was used to test the LD between pairs of SSR loci using the software package TASSEL. 7.08% of possible SSR locus pairs showed significant level of linkage disequilibrium (P<0.01). By using mixed linear model, 5 SSR loci from linkage groups 2, 10, 11 and 18 of tobacco reference map were identified as DNA markers to be linked to gene(s) controlling broomrape resistance in tobacco.

Volume 18, Issue 111 (May 2021)
Abstract

Nowadays, the use of tissue culture technique in the production of plant secondary metabolites, such as phenolic compounds, as a natural food additive has become very widespread in the food industry. The aim of this study was to investigate and compare the content of phenolic compounds and antioxidant activity of grapevine Rasha and Qzel Ozum cultivars that were produced by tissue culture under in vitro condition. For this purpose, the terminal buds of grape cultivars were cultured in Murashige - Skoog Medium to produce complete seedlings. Then the methanolic extract was prepared from healthy grapevine leaves and to perform polyphenol composition tests using high performance liquid chromatography with ultraviolet detector, functional groups using Fourier-transform infrared spectroscopy, total phenol content, total flavonoids, total anthocyanins, total carotenoids, acid content, ascorbic acid, free radical scavenging 2,2-diphenyl-1-picrylhydrazyl (DPPH), and hydroxyl  (OH). The results showed that the amount of total phenolic compounds, total flavonoids, total anthocyanin and total carotenoids of methanolic extracts of Rasha cultivar were 50.35±0.10, 29.72±0.05, 10.41±0.20, and 1.82±0.50 mg/g, respectively, and in Qzel Ozum cultivar were 23.06±0.31, 20.76±0.15, 7.28±0.15, and 94.94±0.42 mg/g, respectively. Ascorbic acid, DPPH and OH free radicals scavenging activity in methanolic extracts of Rasha leaves were 1.83±0.04, 25.38±1.52, and 75.04±2.74 %, respectively, and in Qzel Ozum leaves were 0.85±0.01, 18.71±2.05 and 68.96±3.61 %, respectively. As a general result, the results showed that the grape leaves of the Rasha cultivar were more than the grapevine leaves of Qzel Ozum cultivar in terms of all studied characteristics (p <0.05). This study also showed that grape leaves are rich in phenolic compounds and natural antioxidants and have the potential to be used in the food and pharmaceutical industries.

Volume 24, Issue 2 (3-2022)
Abstract

Soil salinity is one of the most important environmental constraints that reduce plant growth and productivity. This study aimed to investigate the effects of various NaCl concentrations on the physiological properties of grape cultivars. NaCl was added at three levels (0, 25, and 50 mM) to Murashige and Skoog medium under in vitro conditions to assess various effects on 21 grape cultivars. Effects of salinity stress were investigated on ascorbate peroxidase, catalase, and superoxide dismutase activities, as well as malondialdehyde, protein, proline, chlorophyll A and B contents, of all samples. The results showed that with an increase in salinity, the amount of antioxidant enzymes, proline content, and protein increased in cv. Rasha, suggesting that it was more tolerant than the other cultivars. Malondialdehyde and Electrolyte leakage accumulation also increased in all cultivars, but this increase was higher in salinity-sensitive cultivars, such as hybrids and wild cultivars than resistant cultivars. During salinity stress, chlorophyll content decreased, and the lowest decrease in chlorophyll content was recorded in cv. Rasha, compared to other cultivars. This research demonstrated that the resistance of cv. Rasha, H6 and H4 to salinity stress was due to its ability to adjust proline, protein content, and antioxidant enzymes.

Page 1 from 1